Server: Viento (Flask)
eDNAmap
A Web Tool and Database for eDNA Metabarcoding in the Northwestern Pacific and Beyond
Instruction Fish Habitat GitHub
 
 
Status    
Ready.
Mode Mapping only (≈30 seconds) Species list comparison
Species detection around Japan

Select a species or recorded taxon to view its precomputed detection map. No Execute needed.

DetectedNot detected in selected data
Fixed data: 19 projects around Japan (result 2490)

These maps use a fixed set of 19 projects and 264 sampling locations. The selections under Setting and Species/ASV table below apply to Execute and do not change these maps.

A white marker means no detection in these data; it does not confirm biological absence.

    Exact recorded assignments are mapped. Multiple candidates and unidentified records are listed separately within each family. Families follow the reference phylogenies.

    Freshwater taxa are retained and explicitly labeled freshwater or freshwater / brackish. Detection at a sampling location does not imply a marine habitat.

    Names missing from the previous dropdown (CSV) · Habitat corrections and sources (CSV)

    Setting
    Search species
        or enter keywords
        or upload species/ASV list   Example
    Site names on map
    ASV comparison criteria
    Distance method for composition comparison
    Generate PDF
    Mapping software
     
    Species/ASV table
    Upload excel file  
    Example file .xlsx OTU_Closek19_Ex.xlsx (link),
    ASV_KH20-9_KH22-5_Ex.xlsx,
    ASV_KH22-5_Ex.xlsx,
    ASV_KH20-9_Ex.xlsx,
      .csv species_TEST.csv,
      .txt List_Miya15Kuroshio.txt (link)
       and/or choose projects from the database:
     Sea area Habitat Organism Metabarcoding loci Table Cruise Article
     
    Boso Peninsula
    Surrounding waters Coast Fish mt12S Species.xlsx — Miya22
    Offshore Ocean Fish mt12S ASV.xlsx KS21-8 Lin25
    Offshore Ocean Fish mt12S ASV.xlsx KS23-2 Lin25
     
    Sanriku
    Off Sanriku Ocean Fish mt12S ASV.xlsx KS22-7 Lin25
    Off Joban Ocean Fish mt12S ASV.xlsx KS21-3 Lin25
    Otsuchi Bay Ocean Fish mt12S ASV.xlsx KS21-24 Lin25
    Otsuchi Bay Ocean Fish mt12S ASV.xlsx KS22-11 Lin25
     
    Sea of Japan
    West Ocean Fish mt12S OTU.xlsx:1,2 KS20-13 Lin25
    Tsushima Islands Ocean Fish mt12S ASV.xlsx KS21-12 Lin25
     
    Kuroshio Current
    Extension Ocean Fish mt12S OTU.xlsx:1, 2 KS18-05 Yu22
    Axis Ocean Fish mt12S ASV.xlsx KH20-09 Inoue25
      Ocean Dinoflagellate 18S V4 Species.xlsx KH20-09 Wu24
    Off Shikoku Ocean Fish mt12S ASV.xlsx KS21-11 Lin25
     
    Tokara
    Tokara Str. Ocean Fish mt12S ASV.xlsx KH22-5 Inoue25
    West of Yakushima Island Ocean Fish mt12S ASV.xlsx KS22-15 Lin25
    Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-1 Lin25
    Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-3 Lin25
    Okinawa Island Ocean Fish mt12S ASV.xlsx KH22-4 Lin25
     
    Okinawa
    Okinawa Is. Reef Coral mt12S Genus.xlsx — Nishitsuji23
    Bise Reef Coral mt12S Genus.xlsx — Shinzato21
      Reef Fish mt12S Species.xlsx — Oka20
     
    Tsushima Current
    Korea Str. Ocean Fish mt12S Species.xlsx — Kim22
     
    NW pacific
    Chukchi Sea Ocean Fish mt12S Species.xlsx — Kawakami23
    NW pacific Ocean Fish mt12S ASV.xlsx KH23-2 Lin25
     
    North Sea
    Belgian side Coast Fish mt12S Species.xlsx — Dukan24
     
    Central Pacific
    Palmyra Atoll Reef Fish 18S,mt12S,CO1 OTU.xlsx — Lafferty20
     
    Timor Sea
    Browse Island Reef Fish mt16S Species.xlsx — Bessey20
     
    Eastern Pacific
    Monterey Bay Coast Fish mt12S Species.xlsx — Closek19
     
    Caution: When comparing species/ASV compositions across different projects, be aware that calculated similarities may be biased due to methodological differences, such as primer selection, laboratory protocols, and bioinformatics pipelines.

    Verify species identities, especially freshwater/brackish taxa, using phylogenetic tools such as phyloBARCODER.

    Japanese common names: PMiFish Dictionary.
    Habitat data: Froese, R. and D. Pauly (eds.). 2026. FishBase. World Wide Web electronic publication. See FishBase's citation guidance; cite the original references associated with records used in research. Source-documented habitat corrections are listed in the habitat corrections (CSV).

    16 Oct. 2026: ver.1.0.4 jinoueATg.ecc.u-tokyo.ac.jp Flask in viento